Cancer-miRNA Regulatory Network

Compendium of miRNA Target Genes

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Genes Targeted by hsa-mir-889 in MPM Mesothelioma Gordon Cluster 11 Table contains all genes in the MPM Mesothelioma Gordon cluster number 11. If a gene harbors a predicted miRNA binding site by one of the three inference methods it is displayed in the final column: M = Weeder-miRvestigator predicted site, P = PITA predicted site and T = TargetScan predicted site. Entrez ID Symbol Description hsa-mir-889 7220 TRPC1 transient receptor potential cation channel, subfamily C, member 1 [Source:HGNC Symbol;Acc:12333] T 81671 VMP1 vacuole membrane protein 1 [Source:HGNC Symbol;Acc:29559] zzz999 159 ADSS adenylosuccinate synthase [Source:HGNC Symbol;Acc:292] zzz999 663 BNIP2 BCL2/adenovirus E1B 19kDa interacting protein 2 [Source:HGNC Symbol;Acc:1083] zzz999 1371 CPOX coproporphyrinogen oxidase [Source:HGNC Symbol;Acc:2321] zzz999 143 PARP4 poly (ADP-ribose) polymerase family, member 4 [Source:HGNC Symbol;Acc:271] zzz999 51141 INSIG2 insulin induced gene 2 [Source:HGNC Symbol;Acc:20452] T 54407 SLC38A2 solute carrier family 38, member 2 [Source:HGNC Symbol;Acc:13448] T 665 BNIP3L BCL2/adenovirus E1B 19kDa interacting protein 3-like [Source:HGNC Symbol;Acc:1085] zzz999 10015 PDCD6IP programmed cell death 6 interacting protein [Source:HGNC Symbol;Acc:8766] T 25978 CHMP2B chromatin modifying protein 2B [Source:HGNC Symbol;Acc:24537] T 51704 GPRC5B G protein-coupled receptor, family C, group 5, member B [Source:HGNC Symbol;Acc:13308] zzz999 9318 COPS2 COP9 constitutive photomorphogenic homolog subunit 2 (Arabidopsis) [Source:HGNC Symbol;Acc:30747] zzz999 771 CA12 carbonic anhydrase XII [Source:HGNC Symbol;Acc:1371] T 5170 PDPK1 3-phosphoinositide dependent protein kinase-1 [Source:HGNC Symbol;Acc:8816] zzz999 6646 SOAT1 sterol O-acyltransferase 1 [Source:HGNC Symbol;Acc:11177] T 51465 UBE2J1 ubiquitin-conjugating enzyme E2, J1 (UBC6 homolog, yeast) [Source:HGNC Symbol;Acc:17598] zzz999 6717 SRI sorcin [Source:HGNC Symbol;Acc:11292] T 2617 GARS glycyl-tRNA synthetase [Source:HGNC Symbol;Acc:4162] zzz999 8323 FZD6 frizzled homolog 6 (Drosophila) [Source:HGNC Symbol;Acc:4044] T 23595 ORC3 origin recognition complex, subunit 3 [Source:HGNC Symbol;Acc:8489] zzz999 404672 GTF2H5 general transcription factor IIH, polypeptide 5 [Source:HGNC Symbol;Acc:21157] zzz999 9101 USP8 ubiquitin specific peptidase 8 [Source:HGNC Symbol;Acc:12631] zzz999 3398 ID2 inhibitor of DNA binding 2, dominant negative helix-loop-helix protein [Source:HGNC Symbol;Acc:5361] zzz999 51744 CD244 CD244 molecule, natural killer cell receptor 2B4 [Source:HGNC Symbol;Acc:18171] zzz999 5908 RAP1B RAP1B, member of RAS oncogene family [Source:HGNC Symbol;Acc:9857] zzz999 5358 PLS3 plastin 3 [Source:HGNC Symbol;Acc:9091] T 3336 HSPE1 heat shock 10kDa protein 1 (chaperonin 10) [Source:HGNC Symbol;Acc:5269] zzz999 64065 PERP PERP, TP53 apoptosis effector [Source:HGNC Symbol;Acc:17637] T 51377 UCHL5 ubiquitin carboxyl-terminal hydrolase L5 [Source:HGNC Symbol;Acc:19678] T 57099 AVEN apoptosis, caspase activation inhibitor [Source:HGNC Symbol;Acc:13509] zzz999 79070 KDELC1 KDEL (Lys-Asp-Glu-Leu) containing 1 [Source:HGNC Symbol;Acc:19350] zzz999 54778 RNF111 ring finger protein 111 [Source:HGNC Symbol;Acc:17384] T 29940 DSE dermatan sulfate epimerase [Source:HGNC Symbol;Acc:21144] T 1456 CSNK1G3 casein kinase 1, gamma 3 [Source:HGNC Symbol;Acc:2456] T 5042 PABPC3 poly(A) binding protein, cytoplasmic 3 [Source:HGNC Symbol;Acc:8556] zzz999 29097 CNIH4 cornichon homolog 4 (Drosophila) [Source:HGNC Symbol;Acc:25013] zzz999 5318 PKP2 plakophilin 2 [Source:HGNC Symbol;Acc:9024] T 307 ANXA4 annexin A4 [Source:HGNC Symbol;Acc:542] T 79694 MANEA mannosidase, endo-alpha [Source:HGNC Symbol;Acc:21072] T 5917 RARS arginyl-tRNA synthetase [Source:HGNC Symbol;Acc:9870] zzz999 831 CAST calpastatin [Source:HGNC Symbol;Acc:1515] T 1829 DSG2 desmoglein 2 [Source:HGNC Symbol;Acc:3049] zzz999 27292 DIMT1L DIM1 dimethyladenosine transferase 1-like (S. cerevisiae) [Source:HGNC Symbol;Acc:30217] zzz999 27107 ZBTB11 zinc finger and BTB domain containing 11 [Source:HGNC Symbol;Acc:16740] T 5062 PAK2 p21 protein (Cdc42/Rac)-activated kinase 2 [Source:HGNC Symbol;Acc:8591] zzz999 5445 PON2 paraoxonase 2 [Source:HGNC Symbol;Acc:9205] T 54541 DDIT4 DNA-damage-inducible transcript 4 [Source:HGNC Symbol;Acc:24944] zzz999 114883 OSBPL9 oxysterol binding protein-like 9 [Source:HGNC Symbol;Acc:16386] zzz999 2746 GLUD1 glutamate dehydrogenase 1 [Source:HGNC Symbol;Acc:4335] zzz999 10190 TXNDC9 thioredoxin domain containing 9 [Source:HGNC Symbol;Acc:24110] zzz999 51065 RPS27L ribosomal protein S27-like [Source:HGNC Symbol;Acc:18476] zzz999 23607 CD2AP CD2-associated protein [Source:HGNC Symbol;Acc:14258] zzz999 11319 ECD ecdysoneless homolog (Drosophila) [Source:HGNC Symbol;Acc:17029] zzz999 56929 FEM1C fem-1 homolog c (C. elegans) [Source:HGNC Symbol;Acc:16933] T 26986 PABPC1 poly(A) binding protein, cytoplasmic 1 [Source:HGNC Symbol;Acc:8554] zzz999 440026 TMEM41B transmembrane protein 41B [Source:HGNC Symbol;Acc:28948] zzz999 378 ARF4 ADP-ribosylation factor 4 [Source:HGNC Symbol;Acc:655] T 50807 ASAP1 ArfGAP with SH3 domain, ankyrin repeat and PH domain 1 [Source:HGNC Symbol;Acc:2720] T 91137 SLC25A46 solute carrier family 25, member 46 [Source:HGNC Symbol;Acc:25198] T 23683 PRKD3 protein kinase D3 [Source:HGNC Symbol;Acc:9408] zzz999 10512 SEMA3C sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3C [Source:HGNC Symbol;Acc:10725] zzz999 677 ZFP36L1 zinc finger protein 36, C3H type-like 1 [Source:HGNC Symbol;Acc:1107] T 55037 PTCD3 Pentatricopeptide repeat domain 3 [Source:HGNC Symbol;Acc:24717] T 29074 MRPL18 mitochondrial ribosomal protein L18 [Source:HGNC Symbol;Acc:14477] zzz999 6310 ATXN1 ataxin 1 [Source:HGNC Symbol;Acc:10548] T 3459 IFNGR1 interferon gamma receptor 1 [Source:HGNC Symbol;Acc:5439] zzz999 830 CAPZA2 capping protein (actin filament) muscle Z-line, alpha 2 [Source:HGNC Symbol;Acc:1490] zzz999 5504 PPP1R2 protein phosphatase 1, regulatory (inhibitor) subunit 2 [Source:HGNC Symbol;Acc:9288] P T 64747 MFSD1 major facilitator superfamily domain containing 1 [Source:HGNC Symbol;Acc:25874] zzz999 54209 TREM2 triggering receptor expressed on myeloid cells 2 [Source:HGNC Symbol;Acc:17761] zzz999 60682 SMAP1 small ArfGAP 1 [Source:HGNC Symbol;Acc:19651] T 8543 LMO4 LIM domain only 4 [Source:HGNC Symbol;Acc:6644] zzz999 3091 HIF1A hypoxia inducible factor 1, alpha subunit (basic helix-loop-helix transcription factor) [Source:HGNC Symbol;Acc:4910] P T 5906 RAP1A RAP1A, member of RAS oncogene family [Source:HGNC Symbol;Acc:9855] zzz999

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